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computational biology

March 12, 2025

Marine Biologics Debuts SuperCrudes, the ‘World’s First Programmable Biomass’

This week at Future Food Tech, Marine Biologics will showcase its technology—a platform that digitally maps the biochemistry of seaweed and its properties – which the company claims has created what is the world’s first programmable biomass.

According to the company, its proprietary cheminformatics platform, MacroLink, maps the molecular compositions of seaweed and stabilizes them into customizable, liquid-based macroalgae solutions called SuperCrudes. SuperCrudes, which are liquefied blends derived from seaweed harvested from specific geographic locations, are analyzed to document their mineral, protein, and carbohydrate compositions. This process allows Marine Biologics to benchmark each product similarly to how oil refineries grade petroleum based on extraction origin.

The company was founded by former crypto industry executive Patrick Griffin, who told Wired he transitioned from crypto to building a platform that could digitally understand seaweed after a surfing accident caused him to reevaluate his priorities.

Ironically, the accident reignited his enthusiasm for the ocean. Griffin recognized a gap in the climate resiliency market concerning fundamental building materials. Even if all other global climate resiliency efforts—such as vehicle electrification and renewable energy investments—were successful, products would still be largely built upon plastics or other petroleum-based materials.

“The chemicals and materials that we use today are, by and large, built on petroleum,” Griffin says. “It’s the last piece of the puzzle you’ll really have to chip away at to make a significant impact.”

Griffin believes his company can substantially reduce the costs and variability traditionally associated with bio-based sourcing by standardizing seaweed extracts into reliable and predictable ingredients.

The broader macro-trend of computational biology is one we’ve been following closely here at The Spoon. Examples include using AI to accelerate pathways toward gene-edited seafood or tracking startups like Shiru, which aim to build food input discovery engines by mapping food’s biological building blocks. Marine Biologics’ technology is particularly intriguing because it closely connects to a specific natural biomass that has previously struggled to gain traction in consumer products—both food and otherwise—due to limited understanding and internal expertise within larger CPG brands.

With this coming-out party for its Macrolink platform, the California-based startup is hoping to change all that, at the same time becoming both a formulation platform as well as a provider of inputs (SuperCrudes) to CPG brands looking for more sustainable inputs.

November 22, 2021

Nuritas Raises a $45 Million Series B Round For AI-Powered Peptide Discovery

Ingredients startup Nuritas announced earlier this month that it has completed a $45 million Series B round. The new funding will help the company to expand globally and scale its tech platform for peptide discovery.

Like proteins, peptides are made up of amino acids. But while proteins consist of long chains of amino acids, peptides are smaller and easier for the body to break down. Nuritas uses its artificial intelligence-powered tech platform to look for new, bioactive peptides in familiar food sources. The resulting ingredients are likely to find applications in the next wave of plant-derived nutritional supplements.

After the artificial intelligence platform makes its predictions about useful peptides, the Nuritas team produces them in experimental quantities and performs in vitro, cell-based testing. If that initial testing confirms the platform’s predictions, the team scales up production, and then moves to preclinical and clinical testing phases to understand the peptides’ effects on human health.

Since its founding in 2014, Nuritas has launched PeptiYouth™, an ingredient that the company says improves cellular regeneration to slow visible signs of aging. They’ve also introduced PeptiStrong™, discovered in fava beans, which improves muscle synthesis and reduces muscle loss. The company plans to introduce both products to the market in early 2022.

The team has established partnerships with big food industry names, including Nestle and Mars. They also plan to explore applications for peptide ingredients in the medical food and cosmetics industries.

Nuritas’ Series B round was led by Cleveland Avenue, a Chicago-based venture capital firm and accelerator for food and restaurant tech startups. (Also in Cleveland Avenue’s portfolio are Beyond Meat and Bartesian, the countertop cocktail-mixing robot.) Participants included food and agriculture investors Wheatsheaf Group and Cultivian Sandbox Ventures, and the European Circular Bioeconomy Fund.

“Our new investors bring a wealth of invaluable expertise,” company founder and CEO Dr. Nora Khaldi said in a press release, “and this latest round will help to build our US headquarters, continue to expand our team, scale our platform to discover more life-changing ingredients and accelerate our route to market.”

Last year, The Spoon noted the rise of computational biology startups taking a targeted approach to ingredient discovery. Nuritas currently boasts the largest peptide knowledge base in the world—and with tools like machine learning becoming more and more relevant to food innovation, that invisible infrastructure could position the company to play a big role in the ingredients supply chain of the future.

January 5, 2021

Brightseed’s First Major Phytonutrient Discovery Finds Black Pepper May Help with Fatty Liver

Brightseed, which uses artificial intelligence (AI) to uncover previously hidden phytonutrients in plants, today announced preclinical data from its first major discovery targeting liver and metabolic health.

The discovery was made with Forager, Brightseed’s AI platform that looks at plants on a molecular level to identify novel phytonutrient compounds (for example, antioxidants in blueberries). Once found, Forager then catalogs these compounds and uses that information to predict the health benefits of those compounds.

With today’s announcement, Brightseed’s Forager has identified phytonutrients that can help with fat accumulation in the pancreas and liver, a condition linked to obesity. Brightseed explained its findings in a press release, writing:

Using a computational approach with data from Brightseed’s plant compound library, Forager identified two natural compounds with promising bioactive function, N-trans caffeoyltyramine (NTC) and N-trans-feruloyltyramine (NTF). Researchers determined that these compounds acted through a novel biological mechanism governing the accumulation and clearance of liver fat. The preclinical data was presented in the fall of 2020 as a poster session at The Liver Meeting® Digital Experience hosted by American Association for the Study of Liver Diseases, and published as abstract #1679 in Hepatology: Vol 72, No S1. 

The release continued:

IIn preclinical studies, NTC and NTF acted as potent HNF4a activators, promoting fat clearance from the steatotic livers of mice fed a high fat diet, by inducing lipophagy.  HNF4a is a central metabolic regulator that is impaired by elevated levels of fat in the bloodstream resulting from chronic overeating. Administered in proper doses, NTC and NTF restored proper function of this central metabolic regulator, including maintaining healthy lipid and sugar levels in the bloodstream to normalize organ function. Their activities were confirmed using a cell-based human insulin promoter activation assay. Forager found NTC and NTF in over 80 common edible plant sources. 

One of those plant sources, Brightseed Co-Founder and CEO, Jim Flatt told me by phone this week, is black pepper. Now, before you run out and grab your pepper grinder, there is still a lot of work that remains before the results of this discovery bear out.

First, the compounds still need to go through clinical trials to validate Brightseed’s initial findings. This includes not only confirming any health benefits, but also determining the doses and best methods for administering the compounds. Then the best plant source for those compounds needs to be determined as well as the best method for compound extraction. Flatt told me that if all goes well, you can expect to see some form of supplement on the market by the end of 2022.

Even though that is a ways off, part of the reason to be excited by today’s announcement is because of how little time it took Brightseed to make this particular discovery. Through its computational processes, Flatt told me his company was able to shrink what used to take years down to months. “Fifteen to 20 percent of time that is computational saves us 80 percent of the time in the lab,” Flatt said.

Brightseed has already analyzed roughly 700,000 compounds in the plant world for health properties and says it’s on track to surpass 10 million by 2025. Doing so could help unlock a number of previously unknown treatments for a number of ailments and conditions as well as general improvement to our metabolic and immuno health.

In addition to independent research such as today’s findings, Brightseed also partners with major CPG brands to help them identify new applications for their products. For instance, Danone is using Brightseed’s technology to help find new health benefits of soy.

Brightseed’s announcement today also reinforces the bigger role AI will play in our food system. AI and machine learning is being used to do everything from turning data into cheese, to solving complex issues around protein folding.

As more discoveries using AI are made, more investment will be poured into the space, which will accelerate even more discoveries.

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